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Archive for category: Featured Articles

Featured Articles

Big data and imaging – algorithms and analytics aid clinical decision making

, 26 August 2020/in Featured Articles /by 3wmedia

A fluid, game-changing combination of mathematical tools and Big Data seems ready to disrupt the field of radiology. However, it also promises to pave the way for what may turn out to be potentially-dramatic advances in healthcare.
There is some irony here. Data was once seen as a liability, to maintain and pay for. It is now being considered a potentially major asset. The key to this turnaround in perspectives lies in increasingly sophisticated, deep learning algorithms, advanced analytics and artificial intelligence which interpret the Big Data and make it usable.

Explosion in image numbers and volume
There is no hyperbole in the use of the term Big Data, as far as radiology is concerned. In recent years, there has been a veritable explosion in the stock of medical images. Emergency room radiologists often examine up to 200 cases a day, and each patient’s imaging studies can be around 250 GB of data. At the upper end, a ‘pan scan’ CT of a trauma patient can render 4,000 images. Currently, about 450-500 petabytes of medical imaging data are generated per year, but this is accelerating. Decisions are made on the basis of small parts of imaging data, the proverbial tip of the iceberg. Much of the information in this data has still to be deciphered and used.

Medical imaging and disease
Medical imaging provides important information on anatomy and organ function as well as detecting diseases states. Its analysis covers a gamut of areas from image acquisition and compression, to  transmission, enhancement, segmentation, de-noising and reconstruction. 
Technology has enabled often-dramatic leaps in image resolution, size and availability. Sophisticated picture archiving and communications systems (PACS) have allowed for the merger of patient images from different modalities and their integration with other patient data for analysis and use in a clinical setting.

Limits to vision – from digital to analogue
So far, radiology information to identify disease or other clinical conditions is presented in the form of images. Although scanners digitize data into pixels, this is reconstructed into shapes and shades or colours for display in a form that can be understood by the human brain. 
This is where the ‘tip of the iceberg’ statement above comes into play. Medical scanners encode an image pixel in 56 bits, equivalent to 72,000 trillion ‘shades’. However, the scanner reduces the data amount to 16 bits, just 65,536 shades, for the human eye. As a result, 40 bits of information is lost, in just one pixel.
At some point in the future, it seems likely that radiologists use numbers rather than images to numerically define and detect patterns of diseases. The process may in fact have already begun.

Imaging analytics and deep learning
Such trends are being fuelled by rapid advances in imaging analytics. Smart, deep learning (DL) algorithms, which analyse pixels and other digital data bytes within an image, have the capacity to detect specific patterns associated with a pathology and provide conclusions in terms of a numerical metric.
One example of the use of numbers as a diagnostic definition concerns the use of algorithms in CT images to calculate bone density. The result is compared to a reference number, which au tomatically trigger alerts on low bone density. Avoiding the need for another dedicated examination, a physician can determine if a patient needs calcium supplements or another preventative measure.
Such algorithms also learn over time, and become better at what they do, resulting in even greater speed and more confidence in the future. Such a process has been driven by the steady acceleration, over the years, in computer processing speed. Indeed, while training an algorithm at the turn of the century took 2-3 months, the same results can now be achieved and iterated within minutes.

Neural systems and algorithms

Technically, deep learning produces a direct mapping from raw inputs to outputs such as image classes. Many DL algorithms are inspired by biologic neural systems. They are different from traditional machine learning, which requires manual feature extraction from inputs, and face limitations to use in the face of the large volumes of information associated with Big Data.
Big Data’s virtuous circle
Many DL algorithms directly seek to harness Big Data in radiology. Gigantic (and fast-growing) image libraries are being accessed for investigation to develop, test, validate and continuously refine algorithms, with the aim of covering a whole range of pathologies.
For radiologists, analytic results from an examination can be comprehensively evaluated against similar data obtained over a long period of time and evaluated to suggest appropriate diagnosis in current scenarios.

Such a virtuous cycle of algorithms and Big Data have become the focus for a host of major medical technology vendors as well as start-ups. However, the key enabling players are radiology departments, who own the data repositories and are uniquely placed to curate the data, in other words, organize it from fragments and make it available for running analytical algorithms.
The above process has, in some senses, been jump-started by previous efforts to data mine reports from radiology departments as they transitioned from PACS to enterprise imaging. The next step in this Big Data-driven opportunity will consist of linking information in radiology reports to the pixels of medical images.

The pixel goldmine
Few doubt any more that pixels are a goldmine, holding wholly new insights into a medical image and how best they could be utilized, not just by radiologists but other clinicians offering patient care. Alongside data mined from electronic medical records, quantitative pixel-based analysis algorithms are increasingly likely to be used to find patterns in images.

Big Data-based screening algorithms, for example, can be used to highlight subtle, multi-dimensional changes in a nodule or a lesion. This can be followed by applications such as curved planar or 3D multi-planar reconstructions, or dynamic contrast enhancement (DCE) texture analysis on highly targeted data subsets, instead of making the time-consuming effort of querying a complete imaging dataset. 

Specific examples of such an approach might include diagnosis of lesions in the liver and identification of disease-free liver parenchyma. Another would be volume analysis of lung tumours and solitary pulmonary nodules to decide temporal evolution of lesion. Big data based pattern analysis modules can detect areas of opacities, honeycombing, reticular densities and fibrosis, and thereby provide a list of differentials, using computer aided diagnostic tools.
For tumours, in general, radiologists can run algorithms to check contrast enhancement characteristics, and such metrics can be compared to prior results as well as other pathology data to provide a specific differential list.

Decision support systems
One decision support system based on Big Data assists physicians in providing treatment planning for patients suffering from traumatic brain injury (TBI). The algorithm couples demographic data and medical records of the patient to specific features extracted from CT scans in order to predict intracranial pressure (ICP) levels.
Google’s entry into this field seeks to address real world limitations – not just in terms of human capacities but also trained medical personnel. Its first deep learning imaging algorithm sought to recognize diabetic retinopathy, the fastest growing cause of blindness in poor countries, where a shortage of specialists meant many patients lost their sight before diagnosis.

The promise of AI
Google’s algorithm is based on artificial intelligence (AI), seen as an especially promising catalyst for advances in such areas.
AI-based algorithms, for example,  can calculate the volume of bleed on the basis of multiple brain CT slices in stroke patients, with the size of bleed volume indicating urgency as well as care pathway. Another recent algorithm assesses recent infarcts on CT, which can be missed if they are hyper-acute (less than 8-12 hours old), and is therefore relevant to all patients with sudden onset weakness. The University of California in San Francisco has been testing an algorithm to identify pneumothorax in chest radiographs of surgery patients, before they exit the OR (operating room).  The aim is to not only avoid the huge costs of a collapsed lung but also ensure that the OR is freed from being used for an otherwise-avoidable procedure.
AI is also being considered for workflow management and triaging. In the near future, it is almost certain that images are screened as data is acquired by a scanner, to distinguish between ‘normal’ and ‘abnormal’ images, prioritize cases according to the likelihood of disease and alerting radiologists to conditions that require urgent attention. The results are tangible and impressive. One algorithm has helped physicians to shrink the time for cardiac diagnoses from 30 minutes to 15 seconds.

Certain vendors are leveraging AI to correlate findings on properties like morphology, cell density or physiological characteristics to expert radiologist’s reports, while taking additional clinical data such as biopsy results into account. Others use reasoning protocols as well as visual technologies such as virtual rendering to analyse medical images. This is then combined with data from a patient’s medical record to offer radiologists and clinicians decision-making support.

AI and the radiologist
So far, algorithms and emerging metrics are expected to be largely used as a complement to decisions made by radiologists.
However, at some point in the future, it seems plausible that radiologists no longer need to look at images at all. Instead, they would simply analyse outcomes of the algorithms.
Once again, AI is at play here. Apart from deep learning algorithms, radiology can claim to be witness to the first successes with the emerging science of ‘swarm’ AI, which helps form a diagnostic consensus by turning groups of human experts into super experts.  Swarm AI is directly based on nature, which sees species accomplishing more by participating in a flock, school or colony (a ‘swarm’) than they can individually. One report, published in ‘Public Library of Science (PLOS)’, stated that swarm intelligence could improve other types of medical decision-making, ”including many areas of diagnostic imaging.”
In December 2015, a study in ‘IET Systems Biology’ reported about a swarm intelligence algorithm which assisted “in the identification of metastasis in bone scans and micro-calcifications on mammographs.” The authors, from universities in the UK and India, also reported about the use of the algorithm in assessing CT images of the aorta and in chest X-ray. They proposed a hybrid swarm intelligence approach to detect tumour regions in an abnormal MR brain image.

The future: human-machine symbiosis

AI is unlikely to become a replacement for radiologists, but a tool to help them. According to Curt Langlotz, MD, PhD, professor of radiology and biomedical informatics at Stanford, the “human-machine system always performs better than either alone.”

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Arab Health 2018, 29 Jan – 1 Feb, Dubai

, 26 August 2020/in Featured Articles /by 3wmedia
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IHF 2018: Better performance and quality through focused innovation

, 26 August 2020/in Featured Articles /by 3wmedia
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Production of Thermosensitive Chart Recording Papers and Accessories 2018

, 26 August 2020/in Featured Articles /by 3wmedia
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IHF Recognition Awards for 2016

, 26 August 2020/in Featured Articles /by 3wmedia
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Inspiring your vision

, 26 August 2020/in Featured Articles /by 3wmedia
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40th ISICEM, March 24-27, 2020, Brussels

, 26 August 2020/in Featured Articles /by 3wmedia
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Functional MRI – opening new frontiers in the brain

, 26 August 2020/in Featured Articles /by 3wmedia

Functional magnetic resonance imaging (fMRI) is by far the principal method used to investigate the brain’s cortical areas and subcortical structures. fMRI has dramatically transformed perceptions of the human brain, allowing precise delineation of regions associated with a vast range of external stimuli and moods – ranging from depression and anger to laughter and play. 
Researchers are now exploring further expansion in the scope of fMRI. These range from the development of more precise sensors and probes with quicker response times to the use of fMRI in new applications such as artificial intelligence. Some have even sought to extract images seen by viewers directly out of their brains.

From dog language to crocodile music
Some have also sought to see if fMRI can work in other species of living things.
In 2016, scientists in Hungary concluded that dogs can understand the meaning and tone of human speech, and that they process language in the same way humans do. To reach this conclusion, they managed to get 13 pet dogs to lie completely motionless in an fMRI scanner for eight minutes while wearing earphones and a radio-frequency coil on their heads.
Earlier this year, a team at Germany’s Ruhr-University in Bochum went further than canines by using fMRI to study the brain of a Nile crocodile as it heard complex sounds, including classical music by Bach.

The eye sees, the brain predicts vision

Given the increasing number of ultra-high field systems available worldwide, experts expect a dramatic impact on our understanding of the brain due to sustained enhancements in resolution (both spatial and temporal), as well as in sensitivity and specificity.
Early this year, researchers from the University of Glasgow published results of a fMRI-based experiment to confirm the capability of the visual cortex to make predictions about what a viewer would see next. The study sought some answers to a seemingly perplexing question. Human beings move their eyes approximately four times per second, requiring their brains to process new visual data every 250 milliseconds. In spite of such rapid and constant variation in perspective and image, how is it that the world remains stable ?
The functional MRI used by the Glasgow researchers showed that the brain rapidly adjusts its predictions, with the visual cortex feeding back updates to a new predicted coordinate every time the eyes move.

The Glasgow study established the importance of fMRI in new frontiers of neuroscience research. fMRI is now seen as a means to contribute to research into mental illness as well as help the development of artificial intelligence. Indeed, a better understanding of the predictive mechanism in the human brain may directly lead to breakthroughs in brain-inspired artificial intelligence in the future – especially in terms of visual predictive capabilities.

The role of calcium ions in brain activity
Beyond such frontiers, MRI technology is also undergoing other forms of evolution. Some of these, which involve new sensors and pathways to monitor neural activity deep within the brain, are not just path-breaking but also offer the possibility of profound new insights into understanding how human beings think.
One of the most exciting developments in such a context involves the tracking of calcium ions, which are closely correlated to neuronal firing and brain signalling. MRI typically detects changes in blood flow, and its utility derives from the fact that when a region of the brain is in use and neuronal activation ensues, blood flow to that region also increases. However, such a process provides only indirect clues; the signals are difficult to attribute to a specific underlying cause. By contrast, sensing based on calcium ions may allow linkage of neuron activity patterns to specific brain functions, and thereby enable researchers to understand how different parts of the brain intercommunicate during particular tasks.
Indeed, it has been several years since neuroscientists know that calcium ions rush into a cell after a neuron fires an electrical impulse, and have used fluorescent molecules to label calcium and then image it via traditional microscopy. Though the technique has allowed for precisely tracking neuron activity, its practical use has been limited to small regions of the brain.

MIT designs calcium detecting molecular probe

At the Massachusetts Institute of Technology (MIT), researchers have sought a way to image calcium using MRI, in order to allow for the analysis of much larger volumes of brain tissue than was possible by fluorescent labelling. To do this, the MIT researchers designed a new molecular probe whose architecture can detect subtle changes in calcium concentrations outside of cells and respond in a way that can be tracked with MRI. Such a process allows for direct correlation to neural activity deep within the part of the brain known as the striatum.
Tests in rats enabled the MIT researchers to establish that calcium sensors accurately detect changes in neural activity from electrical or chemical stimulation. The levels of extracellular calcium correlate with low neuron activity. In other words, when calcium concentrations drop, neurons in the area are firing electrical impulses.
The goal of the researchers is to greatly enhance precision in mapping neural activity patterns. By measuring activity in different regions of the brain, they hope to find how different types of sensory stimuli are encoded by the spatial pattern of neural activity which is induced.

The MIT probe essentially consists of a sensor made up of two kinds of particles which bind in the presence of calcium. The first is synaptotagmin, a naturally occurring calcium-binding protein, and the other a lipid-coated magnetic iron oxide nanoparticle which binds to synaptotagmin, but does this only if calcium is present. Calcium binding leads to the particles clumping together, and appearing darker in the MRI image.
The researchers are now attempting to increase the speed of response by the sensor, which currently requires a few seconds after the stimulation. A more important goal is to modify the sensor such that it can pass through the blood-brain barrier. This would enable the delivery of the particles without the need to inject them directly in the test site, as is required at present.
Research into new sensors and neurochemical pathways, as being done at MIT, will no doubt open new vistas in fMRI. However, other efforts too are expected to greatly enhance the range and spectrum of its applications.

Powering up fMRI machines

In May 2013, the European Journal of Radiology published results of a study comparing fMRI at 7T compared to 3T in imaging of the amygdala, a ventral brain region of specific importance to psychiatry and psychology. Traditionally, MRI imaging of such areas is prone to signal losses along susceptibility borders – alongside signal fluctuations due to physiological artifacts from respiration and cardiac action. The increase from 3T to 7T showed a significant gain in percental signal change and demonstrated the potential benefits of ultra-high field fMRI in ventral brain areas.

UC Berkeley targets massive resolution boost in fMRI

More recent efforts are also aimed at enhancing resolution. Today’s top-of-the line scanners, incorporating 10T magnets, can typically localize activity within a region comprising 100,000 neurons or more, about the size of a grain of rice. To be able to concentrate more finely, on smaller groups of neurons, requires a bottom-up re-design of almost the entire gamut of scanner components and sub-systems.
The University of California at Berkeley is currently targeting a 20-fold boost in fMRI resolution in order to provide the most detailed images of the brain ever seen. The project is funded by a BRAIN Initiative grant from the National Institutes of Health.

New approach to fMRI design and architecture
The leap in resolution will be directly due to innovations in hardware design, scanner control and image computation. Currently, spatial resolution of fMRI recordings is based on variations in the magnetic field as well as, indirectly, on the size of detector. The latter consist of coils of wire, which are arrayed around the head of a subject and pick up signals. The Berkeley system uses a far larger number of smaller coils than clinical MRIs, which use smaller numbers of large coils. The result is straightforward – a much higher resolution of the brain’s outer surface, which is needed to identify key layers of the cortex.
Reducing dimensions in such ultra-high resolution MRI holds the key to image the brain in functional regions, where neurons are all essentially involved in the same type of processing. The target which researchers hope to reach is in the range of 0.4 millimetres This is because the cerebral cortex, the brain’s outer layer, consists of columns of neurons which correspond to a specific sensory feature (such as the vertical rather than horizontal edge of an object) and such columns are 0.4 millimetres on the side and 2 millimetres long. The Berkeley researchers are reported to be confident of their ability to build machines which can scan down to the 0.4 millimetre target by 2019.

Peering into the brain’s depths
If successful, the new fMRIs would allow researchers to study cortical microcircuits and glimpse the deepest recesses of human brain function so far. The developers of the system are ambitious. They aim to provide “the most advanced view yet of how properties of the mind, such as perception, memory and consciousness, emerge from brain operations.” This will open ways to observe disturbances in brain structures and functions, and it is hoped, radically enhance the diagnosis and understanding of neurological diseases.

Extracting images out of the brain
One of the most far-reaching possibilities of fMRI was recently announced by a team from the Japan’s Kyoto University, who used machine-learning and artificial intelligence to translate brain activity into images in test subjects.
These ranged from pictures being looked at by the subjects, to things they remembered seeing. The images included a lion, a fly, a DVD player, a postbox, alphabets and geometric shapes, and were recreated pixel by pixel, based on a deep neural network (DNN). 
The images were projected on to a screen in an fMRI scanner, with the heads of subjects secured in place via a bar on which they had to bite down. The subjects, who participated in multiple scanning sessions for a period of more than 10 months, stared at each image for several seconds before taking a rest. After this, they had to recall one of the images seen previously and picture it in their mind.
The DNN was then used to decode the signals recorded by the fMRI scanner and produce a computer-generated reconstructed image of what the participants saw.

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BeneHeart C Series – Automated external defibrillator (AED)

, 26 August 2020/in Featured Articles /by 3wmedia
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Organ donation, the opt-in or opt-out debate

, 26 August 2020/in Featured Articles /by 3wmedia

The shortage of transplant organs is a pressing issue around the world. In an effort to increase the number of donated organs, various initiatives have been implemented in a number of countries to prompt people to donate their organs in the event of death.
Some of these interventions are referred to as nudges. Nudges are psychological and refer to behavioural change interventions that alter people’s behaviour by modifying the context of their choice in such a way as to make the “better” option the most salient or easiest choice without substantially changing the underlying incentive structure.
Several countries, such as Germany, Denmark, Lithuania and the Netherlands have a default opt-in registry whereby citizens have to actively choose to register as an organ donor. However, some countries, such as Austria, Spain, France, Italy, Belgium, Sweden and Greece have an opt-out system whereby citizens are automatically registered as organ donors and have to actively choose to opt-out if they prefer not to be an organ donor.
However, whether opt-in or opt-out, most organ donation legislative systems include a clause that allows the final decision to donate to be made by family members of the deceased.
In the United kingdom the NHS Blood and Transplant reported in 2016 that more than 500 families vetoed organ donations between 2010 and 2015 despite being informed that their relative was on the opt-in NHS Organ Donation Register. This translated into an estimated 1,200 people missing out on potential life-saving transplants.
This was one of the reasons why England recently announced plans to change their opt-in registry to an opt-out one in 2020.
However, a recent study from Queen Mary University of London argues this move is unlikely to result in any significant increase in donated organs. Although the authors of the study note that several studies have shown that default opt-out systems have substantially increased registered donations and give examples from Belgium where kidney donations increased from 10.9 to 41.3 per million people during a 3-year period, and from Singapore where kidney donations increased from 4.7 to 31.3 per year over a 3-year period.
Nonetheless, in the study, published in May this year, the authors argue that under an opt-out system the family would perceive the donor’s preference as weaker because it involves a passive choice to donate compared to a default opt-in system where an active choice to donate is made.
The study concludes that the opt-out system is unlikely to increase actual rates of organ donation or reduce veto rates, all it will do is increase the number of people on the organ donation register.

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